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GEO accession:
Sample GSM2801
Query DataSets for GSM2801
Status
Public on Nov 21, 2002
Title
Mnk_3204-T-7
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3204
Typical progression group
Seven weeks Post-Infection with SIV MAC251
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
16
2
19
0.8
22793
P
AFFX-BioB-M_at
17
0
19
0.85
26083
P
AFFX-BioB-3_at
16
0
19
0.8
18497.6
P
AFFX-BioC-5_at
18
0
19
0.9
56042.3
P
AFFX-BioC-3_at
19
0
20
0.95
56555.3
P
AFFX-BioDn-5_at
19
0
20
0.95
29159.7
P
AFFX-BioDn-3_at
16
1
18
0.8
81445.8
P
AFFX-CreX-5_at
20
0
20
1
377121
P
AFFX-CreX-3_at
20
0
20
1
430952.7
P
AFFX-BioB-5_st
5
5
19
0.25
2319.2
A
AFFX-BioB-M_st
8
6
18
0.4
333.9
A
AFFX-BioB-3_st
7
9
20
0.35
-5094.1
A
AFFX-BioC-5_st
4
8
17
0.2
-1607.3
A
AFFX-BioC-3_st
4
7
18
0.2
-339.3
A
AFFX-BioDn-5_st
8
5
19
0.4
3854.7
A
AFFX-BioDn-3_st
8
2
19
0.4
5342.7
P
AFFX-CreX-5_st
6
4
18
0.3
2672
A
AFFX-CreX-3_st
7
6
18
0.35
1472.6
A
hum_alu_at
62
0
69
0.9
1213808.8
P
AFFX-DapX-5_at
6
2
19
0.3
578.4
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
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