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Sample GSM29627 Query DataSets for GSM29627
Status Public on Sep 30, 2004
Title Rat striatum SAGE
Sample type SAGE
Anchor NlaIII
Tag Count 22090
Tag Length 10
 
Source name rat striatum (Sprague-Dawley)
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description SAGE profile from rat striatum treated with saline
Keywords = rat
Keywords = striatum
Keywords = SAGE
 
Submission date Aug 26, 2004
Last update date Nov 19, 2008
Contact name Ning-sheng Cai
E-mail(s) ncai@intra.nida.nih.gov
Phone 410-550-2732
Fax 410-550-2745
Organization name National Institute on Drug Abuse
Department Molecular Neuropsychiatry Branch
Street address 5500 Nathan Shock Drive
City Baltimore
State/province MD
ZIP/Postal code 21224
Country USA
 
Platform ID GPL23
Series (1)
GSE1711 Striatum from rats treated with methamphetamine

Data table header descriptions
TAG Tag Sequence;
COUNT Tag Number
TPM tags per million

Data table
TAG COUNT TPM
ATAACACATA 716 32412.86
ATACTGACAC 491 22227.25
CAAACATCCA 235 10638.30
GTGACCACGG 207 9370.76
GCTTCATCCA 183 8284.29
TAGGTACAGG 121 5477.59
GTGGCTCACA 111 5024.90
CGCAAGGCCC 110 4979.63
AATCAACCCG 108 4889.09
TGGGTTGTCT 107 4843.82
CTAGTCTTTG 98 4436.40
CACCCATACC 93 4210.05
TCAGGCTGCC 88 3983.70
CACATACAAA 81 3666.82
CACAGCGTTG 79 3576.28
AATCGGAGGC 78 3531.01
TTGGTGAAGG 77 3485.74
TTGTTAGTGC 74 3349.93
AGCCGTCCCT 68 3078.32
GTGACAACTG 65 2942.51

Total number of rows: 9897

Table truncated, full table size 185 Kbytes.




Supplementary data files not provided

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