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Status
Public on Apr 15, 2010
Title
rhesus hippocampal CA1, 6.50 years old, replicate 1
Sample type
RNA
Source name
Rhesus hippocampus CA1
Organism
Macaca mulatta Characteristics
Female
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
rhesus hippocampal CA1, 6.50 years old, replicate 1
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jun 05, 2008
Last update date
Mar 15, 2010
Contact name
Eric M Blalock
E-mail(s)
eric.blalock@uky.edu Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL3535 Series (1)
GSE11697 Young and aged rhesus hippocampal CA1 and DG
Data table header descriptions ID_REF Probe Set
VALUE MAS5-calculated Signal intensity
DETECTION P-VALUE the probability that a probe set is absent, ranging from 0 to 1 (in this study, probe set with p < 0.05 were considered present)
Data table ID_REF VALUE DETECTION P-VALUE AFFX-BioB-5_at
465
0.000753643
AFFX-BioB-M_at
559
0.00010954
AFFX-BioB-3_at
404
5.17E-05
AFFX-BioC-5_at
1303
0.00010954
AFFX-BioC-3_at
1671
4.43E-05
AFFX-BioDn-5_at
2666
4.43E-05
AFFX-BioDn-3_at
5752
0.000169227
AFFX-CreX-5_at
14039
5.17E-05
AFFX-CreX-3_at
16275
4.43E-05
AFFX-DapX-5_at
22
0.3270795
AFFX-DapX-M_at
12
0.5740377
AFFX-DapX-3_at
7
0.6030805
AFFX-LysX-5_at
6
0.7492043
AFFX-LysX-M_at
5
0.8520612
AFFX-LysX-3_at
15
0.2877431
AFFX-PheX-5_at
6
0.5
AFFX-PheX-M_at
5
0.9370707
AFFX-PheX-3_at
13
0.7942677
AFFX-ThrX-5_at
27
0.4113802
AFFX-ThrX-M_at
35
0.05421337
52865 1834 Kbytes .Supplementary file Size Download File type/resource GSM297140.CEL.gz
5.1 Mb
(ftp) (http) CEL
Processed data included within Sample table
