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Sample GSM297145 Query DataSets for GSM297145
Status Public on Apr 15, 2010
Title rhesus hippocampal CA1, 23.25 years old, replicate 11
Sample type RNA
 
Source name Rhesus hippocampus CA1
Organism Macaca mulatta
Characteristics Female
Extracted molecule total RNA
Extraction protocol Standard Affymetrix
Label Standard Affymetrix
Label protocol Standard Affymetrix
 
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description rhesus hippocampal CA1, 23.25 years old, replicate 11
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
 
Submission date Jun 05, 2008
Last update date Mar 15, 2010
Contact name Eric M Blalock
E-mail(s) eric.blalock@uky.edu
Phone 859-323-8033
Organization name University of Kentucky
Department Molecular and Biomedical Pharmacology
Lab Blalock
Street address 800 Rose St.
City Lexington
State/province KY
ZIP/Postal code 40475
Country USA
 
Platform ID GPL3535
Series (1)
GSE11697 Young and aged rhesus hippocampal CA1 and DG

Data table header descriptions
ID_REF Probe Set
VALUE MAS5-calculated Signal intensity
DETECTION P-VALUE the probability that a probe set is absent, ranging from 0 to 1 (in this study, probe set with p < 0.05 were considered present)

Data table
ID_REF VALUE DETECTION P-VALUE
AFFX-BioB-5_at 613 0.000662269
AFFX-BioB-M_at 939 7.01E-05
AFFX-BioB-3_at 539 0.000258358
AFFX-BioC-5_at 1557 6.02E-05
AFFX-BioC-3_at 2109 4.43E-05
AFFX-BioDn-5_at 4232 4.43E-05
AFFX-BioDn-3_at 7145 7.01E-05
AFFX-CreX-5_at 17009 5.17E-05
AFFX-CreX-3_at 19790 4.43E-05
AFFX-DapX-5_at 36 0.1479388
AFFX-DapX-M_at 24 0.5297595
AFFX-DapX-3_at 8 0.8520612
AFFX-LysX-5_at 8 0.5297595
AFFX-LysX-M_at 22 0.6593388
AFFX-LysX-3_at 11 0.313723
AFFX-PheX-5_at 5 0.7248541
AFFX-PheX-M_at 2 0.9915595
AFFX-PheX-3_at 12 0.5445875
AFFX-ThrX-5_at 4 0.8764277
AFFX-ThrX-M_at 4 0.686277

Total number of rows: 52865

Table truncated, full table size 1835 Kbytes.




Supplementary file Size Download File type/resource
GSM297145.CEL.gz 5.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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