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Status
Public on Apr 15, 2010
Title
rhesus hippocampal CA1, 23.25 years old, replicate 11
Sample type
RNA
Source name
Rhesus hippocampus CA1
Organism
Macaca mulatta
Characteristics
Female
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
rhesus hippocampal CA1, 23.25 years old, replicate 11
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jun 05, 2008
Last update date
Mar 15, 2010
Contact name
Eric M Blalock
E-mail(s)
eric.blalock@uky.edu
Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL3535
Series (1)
GSE11697
Young and aged rhesus hippocampal CA1 and DG
Data table header descriptions
ID_REF
Probe Set
VALUE
MAS5-calculated Signal intensity
DETECTION P-VALUE
the probability that a probe set is absent, ranging from 0 to 1 (in this study, probe set with p < 0.05 were considered present)
Data table
ID_REF
VALUE
DETECTION P-VALUE
AFFX-BioB-5_at
613
0.000662269
AFFX-BioB-M_at
939
7.01E-05
AFFX-BioB-3_at
539
0.000258358
AFFX-BioC-5_at
1557
6.02E-05
AFFX-BioC-3_at
2109
4.43E-05
AFFX-BioDn-5_at
4232
4.43E-05
AFFX-BioDn-3_at
7145
7.01E-05
AFFX-CreX-5_at
17009
5.17E-05
AFFX-CreX-3_at
19790
4.43E-05
AFFX-DapX-5_at
36
0.1479388
AFFX-DapX-M_at
24
0.5297595
AFFX-DapX-3_at
8
0.8520612
AFFX-LysX-5_at
8
0.5297595
AFFX-LysX-M_at
22
0.6593388
AFFX-LysX-3_at
11
0.313723
AFFX-PheX-5_at
5
0.7248541
AFFX-PheX-M_at
2
0.9915595
AFFX-PheX-3_at
12
0.5445875
AFFX-ThrX-5_at
4
0.8764277
AFFX-ThrX-M_at
4
0.686277
Total number of rows: 52865 Table truncated, full table size 1835 Kbytes .Supplementary file
Size
Download
File type/resource
GSM297145.CEL.gz
5.0 Mb
(ftp) (http)
CEL
Processed data included within Sample table