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Sample GSM30019 Query DataSets for GSM30019
Status Public on Sep 04, 2004
Title F1340-I10 versus pool
Sample type RNA
 
Channel 1
Source name F1340-I10
Organism Homo sapiens
Characteristics ped.id: 1340
person.id: 10
Description: CEPH 1340 PATERNALGRANDMOTHER GM07000
Biomaterial provider Coriell Cell Repositories identifier GM07000
(http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07000)
Extracted molecule total RNA
 
Channel 2
Source name pool
Organism Homo sapiens
Characteristics A common pool created from equal portions of RNA from all samples.
Biomaterial provider Coriell (http://www.coriell.org/)
Extracted molecule total RNA
 
 
Description Lymphoblastoid cell lines were obtained from Coriell Repositories.
Sample identifiers consist of the family identifier and individual identifier for the sample source.
All individuals were compared to a common pool created from equal portions of RNA from all samples.
See Monks, et al., American Journal of Human Genetics (2004) for details.
 
Submission date Sep 03, 2004
Last update date Nov 21, 2008
Contact name Stephen W Edwards
E-mail(s) Edwards.Stephen@epamail.epa.gov
Phone 425 636 6409
URL http://www.rii.com
Organization name Rosetta Inpharmatics (Merck & Co.)
Department Research Genetics
Street address
City Seattle
State/province WA
ZIP/Postal code 98034
Country USA
 
Platform ID GPL564
Series (1)
GSE1726 Rosetta_Merck_CEPH_Study

Data table header descriptions
ID_REF Rosetta generated unique probe identifier
VALUE MLRATIO: Averaged log10 ratio [log10(CHANNEL1/CHANNEL2), error weighted]
LOGINTENSITY Average log intensity of channels
PVALUE P-value of LogRatio
MLRATIOERROR Error estimate for MLRATIO (VALUE)

Data table
ID_REF VALUE LOGINTENSITY PVALUE MLRATIOERROR
10012684492 -6.9790000000000005E-2 -1.7082200000000001 0.91234514960000002 0.63397000000000003
10012679250 9.0829999999999994E-2 -1.7883100000000001 0.69481691879999996 0.23150999999999999
10017961237 -2.3019999999999999E-2 -0.42215999999999998 0.85492481269999998 0.12589
10012681431 8.1399999999999997E-3 -1.36192 0.95243601629999997 0.13646
10012682280 3.6979999999999999E-2 -2.0821900000000002 0.90711769289999999 0.31697999999999998
10012679330 3.6020000000000003E-2 -1.4494100000000001 0.8202234813 0.1585
10012666020 -0.05697 -1.5485199999999999 0.75947596070000001 0.18607000000000001
10012666532 2.5690000000000001E-2 -1.6999 0.91367592480000004 0.23694000000000001
10012668909 -0.48326999999999998 -0.73668999999999996 2.8999999999999999E-9 8.1430000000000002E-2
10012675176 -0.39388000000000001 -1.2199500000000001 0.1145405709 0.24959000000000001
10012666129 0.24057999999999999 -0.47149999999999997 4.4135000000000002E-6 5.2400000000000002E-2
10012667359 -2.0 -3.0771099999999998 0.86330571369999998 11.616580000000001
10012685183 -0.19616 -1.27403 0.1202720293 0.12626000000000001
10012668951 9.8419999999999994E-2 -1.31033 0.46021413329999999 0.13327
10012669544 3.4909999999999997E-2 -1.13483 0.74352744410000005 0.10668999999999999
10012678741 -0.11463 -2.21963 0.72214516900000003 0.32236999999999999
10012674019 5.3690000000000002E-2 -2.5822600000000002 0.89613203320000001 0.41123999999999999
10012683076 -9.5990000000000006E-2 -2.1311100000000001 0.67850002320000002 0.23157
10012689072 7.8299999999999995E-2 -9.0600000000000003E-3 0.12586335300000001 5.1159999999999997E-2
10012686248 -0.10631 -1.7600899999999999 0.75529839269999999 0.34110000000000001

Total number of rows: 23880

Table truncated, full table size 1953 Kbytes.




Supplementary data files not provided

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