NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM300529 Query DataSets for GSM300529
Status Public on May 20, 2009
Title In vitro matured oocytes rep1
Sample type RNA
 
Source name In vitro matured rhesus MII-stage oocytes
Organism Macaca mulatta
Characteristics In vitro maturation
oocytes
Extracted molecule total RNA
Extraction protocol Total RNA from 4 MII-stage oocytes was extracted and purified using PicoPure kit (Arcturus).
Label biotin
Label protocol Total RNA from 4 MII-stage oocytes was processed through two-rounds of amplification to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from in vitro matured MII-stage oocytes
Data processing The data were normalized with Affymetrix Microarray Suite version 5.0 (MAS 5.0) at the mean target intensity of 150.
 
Submission date Jun 26, 2008
Last update date May 20, 2009
Contact name Young Shin Lee
Organization name Temple University
Department Fels Institute for Cancer Research and Molecular Biology
Street address 3307 N. Broad Street AHB 557
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platform ID GPL3535
Series (1)
GSE11895 Effects of in vitro maturation on oocyte gene expression

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 338.7 P
AFFX-BioB-M_at 573.6 P
AFFX-BioB-3_at 329.3 P
AFFX-BioC-5_at 755.9 P
AFFX-BioC-3_at 1040 P
AFFX-BioDn-5_at 2406.7 P
AFFX-BioDn-3_at 5120.5 P
AFFX-CreX-5_at 10053.8 P
AFFX-CreX-3_at 12534.5 P
AFFX-DapX-5_at 6.1 A
AFFX-DapX-M_at 3.1 A
AFFX-DapX-3_at 14.1 A
AFFX-LysX-5_at 3.9 A
AFFX-LysX-M_at 9.7 A
AFFX-LysX-3_at 13.8 A
AFFX-PheX-5_at 14 A
AFFX-PheX-M_at 0.4 A
AFFX-PheX-3_at 6.2 A
AFFX-ThrX-5_at 1.7 A
AFFX-ThrX-M_at 21.8 A

Total number of rows: 52865

Table truncated, full table size 1463 Kbytes.




Supplementary file Size Download File type/resource
GSM300529.CEL.gz 5.1 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap