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Sample GSM30118 Query DataSets for GSM30118
Status Public on Sep 04, 2004
Title F1408-I4 versus pool
Sample type RNA
 
Channel 1
Source name F1408-I4
Organism Homo sapiens
Characteristics ped.id: 1408
person.id: 4
Description: CEPH 1408 SON GM12148
Biomaterial provider Coriell Cell Repositories identifier GM12148
(http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12148)
Extracted molecule total RNA
 
Channel 2
Source name pool
Organism Homo sapiens
Characteristics A common pool created from equal portions of RNA from all samples.
Biomaterial provider Coriell (http://www.coriell.org/)
Extracted molecule total RNA
 
 
Description Lymphoblastoid cell lines were obtained from Coriell Repositories.
Sample identifiers consist of the family identifier and individual identifier for the sample source.
All individuals were compared to a common pool created from equal portions of RNA from all samples.
See Monks, et al., American Journal of Human Genetics (2004) for details.
 
Submission date Sep 03, 2004
Last update date Nov 21, 2008
Contact name Stephen W Edwards
E-mail(s) Edwards.Stephen@epamail.epa.gov
Phone 425 636 6409
URL http://www.rii.com
Organization name Rosetta Inpharmatics (Merck & Co.)
Department Research Genetics
Street address
City Seattle
State/province WA
ZIP/Postal code 98034
Country USA
 
Platform ID GPL564
Series (1)
GSE1726 Rosetta_Merck_CEPH_Study

Data table header descriptions
ID_REF Rosetta generated unique probe identifier
VALUE MLRATIO: Averaged log10 ratio [log10(CHANNEL1/CHANNEL2), error weighted]
LOGINTENSITY Average log intensity of channels
PVALUE P-value of LogRatio
MLRATIOERROR Error estimate for MLRATIO (VALUE)

Data table
ID_REF VALUE LOGINTENSITY PVALUE MLRATIOERROR
10012684492 3.5029999999999999E-2 -1.4795400000000001 0.89112458949999995 0.25588
10012679250 -4.6460000000000001E-2 -1.5723 0.75576814560000005 0.14938000000000001
10017961237 -4.2610000000000002E-2 -0.44189000000000001 0.73783217779999999 0.1273
10012681431 2.8500000000000001E-2 -1.24292 0.79674263469999995 0.11064
10012682280 -0.13636000000000001 -1.83419 0.58347955439999999 0.2487
10012679330 9.9379999999999996E-2 -1.28278 0.35912037340000003 0.10836999999999999
10012666020 5.7489999999999999E-2 -1.4099699999999999 0.58652818669999995 0.10571
10012666532 3.3169999999999998E-2 -1.51963 0.80435128069999995 0.13391
10012668909 -0.45646999999999999 -0.80628 0.0 6.1080000000000002E-2
10012675176 0.30926999999999999 -0.78993999999999998 1.7999999999999999E-8 0.05493
10012666129 -7.9149999999999998E-2 -0.84984000000000004 0.58011510310000003 0.14307
10012667359 3.7330000000000002E-2 -1.8443000000000001 0.89554573280000005 0.2843
10012685183 -9.4759999999999997E-2 -1.24464 0.35170750629999997 0.10174999999999999
10012668951 -0.19101000000000001 -1.43845 5.9580541700000003E-2 0.10138999999999999
10012669544 0.13825999999999999 -1.08948 7.1197430699999995E-2 7.6630000000000004E-2
10012678741 7.8030000000000002E-2 -1.4942500000000001 0.51170941700000006 0.11891
10012674019 0.00199 -1.72739 0.99212870249999996 0.2016
10012683076 0.12928000000000001 -1.6334200000000001 0.6911653874 0.32541999999999999
10012689072 0.00265 -0.13238 0.95466350150000001 4.6679999999999999E-2
10012686248 0.17451 -1.98973 0.64175212150000005 0.37508000000000002

Total number of rows: 23880

Table truncated, full table size 1958 Kbytes.




Supplementary data files not provided

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