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Sample GSM3020638 Query DataSets for GSM3020638
Status Public on May 03, 2018
Title CD8+Cho
Sample type RNA
 
Source name CD8 T cells treated with cholesterol
Organism Mus musculus
Characteristics cell type: CD8 T cells
treatment: Cholesterol
Treatment protocol CD8 under Tc1 cytokine condition and CD8 under Tc1 cytokine condition with cholesterol treatment.
Growth protocol T cell culture.
Extracted molecule total RNA
Extraction protocol Trizol RNA extraction.
Label Biotin
Label protocol WT Sense Target Labeling.
 
Hybridization protocol GeneChip Hybridization.
Scan protocol Affymetrix GeneChip Command Console (AGCC).
Description Yi-Q17004
Data processing Affymetrix GeneChip Command Console (AGCC) Software.
The 'GSE111033_array_cd8_cd8_cho.txt' file includes raw signals, ratios, and array annotation.
 
Submission date Feb 22, 2018
Last update date May 04, 2018
Contact name xingzhe ma
E-mail(s) mxingzhe@gmail.com
Organization name houston methodist hospital
Department cancer center
Lab qing yi
Street address 6565 fannin street
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL23038
Series (1)
GSE111033 Gene expression in CD8 vs. CD8+Cho cells

Data table header descriptions
ID_REF
VALUE Raw RNA signal

Data table
ID_REF VALUE
TC0100000014.mm.2 255.9973
TC0100000018.mm.2 17.22175
TC0100000021.mm.2 76.89339
TC0100000022.mm.2 6.607401
TC0100000023.mm.2 6.370583
TC0100000027.mm.2 281.1672
TC0100000038.mm.2 389.6709
TC0100000039.mm.2 18.64947
TC0100000041.mm.2 15.20459
TC0100000044.mm.2 160.3592
TC0100000045.mm.2 11.64965
TC0100000048.mm.2 99.32816
TC0100000055.mm.2 16.91937
TC0100000056.mm.2 8.68944
TC0100000064.mm.2 13.26799
TC0100000071.mm.2 7.313767
TC0100000082.mm.2 13.16082
TC0100000092.mm.2 431.9826
TC0100000097.mm.2 30.78964
TC0100000101.mm.2 84.20494

Total number of rows: 28846

Table truncated, full table size 777 Kbytes.




Supplementary file Size Download File type/resource
GSM3020638_Yi-Q17004.CEL.gz 1.1 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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