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Sample GSM30462

Query DataSets for GSM30462

Status

Public on Sep 15, 2004

Title

normal monocyte 4

Sample type

RNA

Source name

normal CD14+ cells from peripheral blood

Organism

Homo sapiens

Extracted molecule

total RNA

Description

CD14+ cells were isolated from normal peripheral blood mononuclear cells by Dako Tuek4 antibody and Rat anti-mouse IgG2a+b magnetic bead selection to >95% purity. Total RNA was isolated with Qiagen RNeasy columns and converted to biotin-labeled cRNA by standard Affymetrix protocols. Targets were produced using standard Affymetrix procedures from about 12ug of total RNA. For analysis with MAS5 the sample was scaled to an arbitrary value of 1000 by overall hybridization intensity to allow comparison of multiple samples.
Keywords = monocyte, CD14

Submission date

Sep 10, 2004

Last update date

May 27, 2005

Contact name

Lynn Graf

E-mail(s)

lgraf@fhcrc.org

Phone

206-667-4545

Fax

206-667-5978

URL

http://none

Organization name

Fred Hutchinson Cancer Research Center

Department

Clinical Research Division

Lab

Torok-Storb

Street address

1100 Fairview Ave. N. D1-100

City

Seattle

State/province

ZIP/Postal code

98109

Country

USA

Platform ID

GPL80

Series (1)

GSE1746

CD14+ cell analysis

Data table header descriptions
ID_REF
VALUE	'signal', a measure of the abundance of a transcript
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A) or marginal (M)
DETECTION P-VALUE	'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
A28102_at	416.2	M	0.042962
AB000114_at	170.1	P	0.026111
AB000115_at	1250.3	P	0.001593
AB000220_at	410.3	P	0.000225
AB000381_s_at	103.5	A	0.440646
AB000409_at	2791.3	P	0.000195
AB000410_s_at	111.7	A	0.772364
AB000449_at	429	P	0.003595
AB000450_at	984.3	P	0.000754
AB000460_at	2192.7	P	0.000509
AB000462_at	520.6	A	0.083592
AB000464_at	585.9	P	0.009337
AB000466_at	128.1	A	0.973889
AB000467_at	503.9	A	0.58862
AB000468_at	2068.7	P	0.000095
AB000584_at	984.8	A	0.205732
AB000816_s_at	32.2	A	0.631562
AB000895_at	211	A	0.783476
AB000896_at	445.7	A	0.382599
AB000897_at	145	A	0.631562

Total number of rows: 7129

Table truncated, full table size 194 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM30462.cel.gz	2.3 Mb	(ftp)(http)	CEL