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Sample GSM305461 Query DataSets for GSM305461
Status Public on Jul 15, 2008
Title B2
Sample type RNA
 
Source name CMPCs
Organism Homo sapiens
Characteristics cardiomyocyte progenitor cells (CMPCs), ScaI+ cells isolated from human fetal heart
Extracted molecule total RNA
Extraction protocol NucleoSpin RNA II purification kit (Macherey Nagel)
Label Cy3
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Description overexpressing human SM-MYOCD (smooth muscle specific myocardin isoform)
Data processing Raw data normalized using global variance stabilization normalization (VSN)
 
Submission date Jul 14, 2008
Last update date Jul 14, 2008
Contact name John van Tuyn
E-mail(s) J.van_tuyn@lumc.nl
Organization name Leiden university Medical Center
Department Cardiology
Street address Albinusdreef 2
City Leiden
ZIP/Postal code 2333ZA
Country Netherlands
 
Platform ID GPL6104
Series (1)
GSE12110 Gene expression profiling of overexpression of myocardin

Data table header descriptions
ID_REF
VALUE Raw data normalized using global variance stabilization normalization (VSN)
Raw Signal
Detection Pval
BEAD_STDEV
Avg_NBEADS

Data table
ID_REF VALUE Raw Signal Detection Pval BEAD_STDEV Avg_NBEADS
ILMN_1804663 163.3723545 252.3455 0.002824859 7.914906 37
ILMN_1651799 3550.624379 3247.566 0 115.1624 47
ILMN_1782558 6.573092532 95.80427 0.9124294 3.750729 34
ILMN_1812262 735.8769288 759.0533 0 18.36302 47
ILMN_1712803 43.88382577 144.6658 0.05932203 5.937415 30
ILMN_1774757 63.60469953 162.9673 0.01836158 6.796356 44
ILMN_1712730 53.4163562 153.5922 0.02683616 4.503202 24
ILMN_1813561 15.30540157 114.1783 0.4279661 3.242167 50
ILMN_1761511 20.23181158 120.4863 0.2966102 3.337454 60
ILMN_1815941 1376.347944 1325.34 0 46.05371 41
ILMN_1711451 14.83219634 113.5041 0.4420904 4.358566 35
ILMN_1728255 11.66433134 108.456 0.5805085 3.615539 44
ILMN_1723582 30.26880903 131.3713 0.07932347 5.417594 41
ILMN_1796374 70.42094241 169.18 0.01553672 6.452266 36
ILMN_1713272 16.9447082 116.4034 0.3771186 4.718002 32
ILMN_1674380 580.9184518 622.0176 0 21.60766 37
ILMN_1660582 242.9461666 322.9389 0.001412429 8.458467 43
ILMN_1717492 21.61330171 122.0954 0.269774 5.15803 41
ILMN_1811370 12.68758287 110.2093 0.5268362 4.136551 36
ILMN_1652243 27.49059814 128.5054 0.1666667 5.932449 36

Total number of rows: 20589

Table truncated, full table size 1087 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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