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Sample GSM305462 Query DataSets for GSM305462
Status Public on Jul 15, 2008
Title B3
Sample type RNA
 
Source name CMPCs
Organism Homo sapiens
Characteristics cardiomyocyte progenitor cells (CMPCs), ScaI+ cells isolated from human fetal heart
Extracted molecule total RNA
Extraction protocol NucleoSpin RNA II purification kit (Macherey Nagel)
Label Cy3
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Description overexpressing human SM-MYOCD (smooth muscle specific myocardin isoform)
Data processing Raw data normalized using global variance stabilization normalization (VSN)
 
Submission date Jul 14, 2008
Last update date Jul 14, 2008
Contact name John van Tuyn
E-mail(s) J.van_tuyn@lumc.nl
Organization name Leiden university Medical Center
Department Cardiology
Street address Albinusdreef 2
City Leiden
ZIP/Postal code 2333ZA
Country Netherlands
 
Platform ID GPL6104
Series (1)
GSE12110 Gene expression profiling of overexpression of myocardin

Data table header descriptions
ID_REF
VALUE Raw data normalized using global variance stabilization normalization (VSN)
Raw Signal
Detection Pval
BEAD_STDEV
Avg_NBEADS

Data table
ID_REF VALUE Raw Signal Detection Pval BEAD_STDEV Avg_NBEADS
ILMN_1804663 198.2521932 265.6914 0.001412429 11.49869 39
ILMN_1651799 3469.519041 2947.141 0 110.615 45
ILMN_1782558 7.394016279 94.46176 0.8375706 2.976359 36
ILMN_1812262 706.7261295 682.8151 0 16.08479 33
ILMN_1712803 37.19114214 131.2111 0.08474576 4.806637 45
ILMN_1774757 64.28809669 154.7075 0.01553672 5.319634 27
ILMN_1712730 52.91132667 145.0033 0.02966102 6.030293 34
ILMN_1813561 21.97484382 116.6223 0.25 3.932344 46
ILMN_1761511 21.261069 115.8635 0.2612994 4.611346 46
ILMN_1815941 1253.792688 1131.224 0 41.2126 27
ILMN_1711451 19.79280964 114.2632 0.289548 5.084279 34
ILMN_1728255 13.43602699 106.3337 0.4971751 3.045551 52
ILMN_1723582 38.08750236 132.0177 0.1194141 5.14381 38
ILMN_1796374 56.80827768 148.3445 0.02683616 5.416784 36
ILMN_1713272 10.49257426 101.5457 0.6497175 2.818537 41
ILMN_1674380 554.8234683 558.2819 0 13.87087 43
ILMN_1660582 239.3997536 299.5118 0.001412429 9.049559 34
ILMN_1717492 24.42409485 119.1488 0.2175141 5.714533 31
ILMN_1811370 18.35592108 112.6356 0.3276836 4.391382 35
ILMN_1652243 37.00570854 131.0438 0.08615819 4.232851 44

Total number of rows: 20589

Table truncated, full table size 1088 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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