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Sample GSM30678 Query DataSets for GSM30678
Status Public on Oct 15, 2004
Title DMD Subject 1, post-oxandrolone, HU133B
Sample type RNA
 
Source name DMD muscle biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description Subject with Duchenne Muscular Dystrophy, after 3-month treatment with oxandrolone (0.1mg/kg/day). Messenger RNA isolated from a gastrocnemius muscle needle biopsy was linearly amplified (two rounds) and biotin-labeled using the protocol of Baugh, et al (Baugh, L. R., Hill, A. A., Brown, E. L., and Hunter, C. P. Quantitative analysis of mRNA amplification by in vitro transcription. Nucleic Acids Res 29(5), E29. 2001). Labeled RNA was hybridized to array using Affymetrix' protocol.
Keywords = muscle
Keywords = Duchenne muscular dystrophy
Keywords = oxandrolone
Keywords = androgen
 
Submission date Sep 15, 2004
Last update date May 27, 2005
Contact name Robert C. Olney
E-mail(s) rolney@nemours.org
Phone 904-390-3674
Fax 904-858-3948
Organization name Nemours Children's Clinic
Department Pediatrics
Lab Cellular and Molecular Laboratory
Street address 807 Children's Way
City Jacksonville
State/province FL
ZIP/Postal code 32207
Country USA
 
Platform ID GPL97
Series (1)
GSE1764 Effect of Oxandrolone on Muscle in Duchenne Muscular Dystrophy

Data table header descriptions
ID_REF
VALUE signal as determined by Affymetrix MAS
ABS_CALL call (A, M, P)(absent, marginal, present) as determined by Affymetrix MAS

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 5714.7 P
AFFX-BioB-M_at 15060.2 P
AFFX-BioB-3_at 8157.5 P
AFFX-BioC-5_at 14015.9 P
AFFX-BioC-3_at 13920.4 P
AFFX-BioDn-5_at 20187.9 P
AFFX-BioDn-3_at 62314.9 P
AFFX-CreX-5_at 156596.1 P
AFFX-CreX-3_at 170252.3 P
AFFX-DapX-5_at 80 A
AFFX-DapX-M_at 233.1 A
AFFX-DapX-3_at 13 A
AFFX-LysX-5_at 298.4 A
AFFX-LysX-M_at 29.1 A
AFFX-LysX-3_at 151.8 A
AFFX-PheX-5_at 29.5 A
AFFX-PheX-M_at 49.3 A
AFFX-PheX-3_at 154.7 A
AFFX-ThrX-5_at 36.7 A
AFFX-ThrX-M_at 28.2 A

Total number of rows: 22645

Table truncated, full table size 400 Kbytes.




Supplementary data files not provided

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