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Sample GSM307098 Query DataSets for GSM307098
Status Public on Jul 23, 2008
Title Fascicle Strained 24h rep1
Sample type RNA
 
Source name Rat tail tendon
Organism Rattus norvegicus
Characteristics Wistar, male, 5-month old, no previous injury
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol biotin
 
Hybridization protocol According to protocol provided by Illumina
Scan protocol Scanning procedures were carried out as described by Illumina
Description n/a
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jul 22, 2008
Last update date Jul 22, 2008
Contact name Eijiro Maeda
E-mail(s) e.maeda@qmul.ac.uk
Organization name Queen Mary, University of London
Department Engineering
Lab Cell and Tissue Engineering
Street address Mile End Road
City London
ZIP/Postal code E1 4NS
Country United Kingdom
 
Platform ID GPL6101
Series (1)
GSE12206 Genome-wide analysis of mechano-responsive gene expression by tenocytes in fascicles subjected to cyclic tensile strain

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection

Data table
ID_REF VALUE Detection
ILMN_2039396 1518.11 P
ILMN_2040732 51.95 A
ILMN_2039699 58.95 A
ILMN_2038916 48.92 A
ILMN_1374916 2196.02 P
ILMN_1353986 50.42 A
ILMN_1366832 55.9 A
ILMN_1366017 49.22 A
ILMN_1354115 49.84 A
ILMN_1356225 53.49 A
ILMN_1373889 58.16 A
ILMN_1372047 58.86 A
ILMN_1372803 54.65 A
ILMN_1369380 54.74 A
ILMN_1366418 45.82 A
ILMN_1349281 200.6 P
ILMN_1354519 51.18 A
ILMN_1363384 48.93 A
ILMN_1373604 50.86 A
ILMN_1356361 65.88 P

Total number of rows: 22517

Table truncated, full table size 463 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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