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Sample GSM307104 Query DataSets for GSM307104
Status Public on Jul 23, 2008
Title Fascicle Strained 1h rep1
Sample type RNA
 
Source name Rat tail tendon
Organism Rattus norvegicus
Characteristics Wistar, male, 5-month old, no previous injury
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol biotin
 
Hybridization protocol According to protocol provided by Illumina
Scan protocol Scanning procedures were carried out as described by Illumina
Description n/a
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jul 22, 2008
Last update date Jul 22, 2008
Contact name Eijiro Maeda
E-mail(s) e.maeda@qmul.ac.uk
Organization name Queen Mary, University of London
Department Engineering
Lab Cell and Tissue Engineering
Street address Mile End Road
City London
ZIP/Postal code E1 4NS
Country United Kingdom
 
Platform ID GPL6101
Series (1)
GSE12206 Genome-wide analysis of mechano-responsive gene expression by tenocytes in fascicles subjected to cyclic tensile strain

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection

Data table
ID_REF VALUE Detection
ILMN_2039396 1636.5 P
ILMN_2040732 52.43 A
ILMN_2039699 59.08 A
ILMN_2038916 38.66 A
ILMN_1374916 1424.4 P
ILMN_1353986 51.63 A
ILMN_1366832 58.8 A
ILMN_1366017 50.93 A
ILMN_1354115 51.41 A
ILMN_1356225 58.83 A
ILMN_1373889 48.68 A
ILMN_1372047 56.38 A
ILMN_1372803 53.12 A
ILMN_1369380 53.49 A
ILMN_1366418 74.02 P
ILMN_1349281 143.45 P
ILMN_1354519 53.06 A
ILMN_1363384 59.22 A
ILMN_1373604 48.63 A
ILMN_1356361 57.9 A

Total number of rows: 22517

Table truncated, full table size 463 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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