NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM307109 Query DataSets for GSM307109
Status Public on Jul 23, 2008
Title Fascicle Unstrained 1h rep3
Sample type RNA
 
Source name Rat tail tendon
Organism Rattus norvegicus
Characteristics Wistar, male, 5-month old, no previous injury
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol biotin
 
Hybridization protocol According to protocol provided by Illumina
Scan protocol Scanning procedures were carried out as described by Illumina
Description n/a
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jul 22, 2008
Last update date Jul 22, 2008
Contact name Eijiro Maeda
E-mail(s) e.maeda@qmul.ac.uk
Organization name Queen Mary, University of London
Department Engineering
Lab Cell and Tissue Engineering
Street address Mile End Road
City London
ZIP/Postal code E1 4NS
Country United Kingdom
 
Platform ID GPL6101
Series (1)
GSE12206 Genome-wide analysis of mechano-responsive gene expression by tenocytes in fascicles subjected to cyclic tensile strain

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection

Data table
ID_REF VALUE Detection
ILMN_2039396 1203.76 P
ILMN_2040732 61.13 A
ILMN_2039699 60.61 A
ILMN_2038916 70.54 P
ILMN_1374916 1445.31 P
ILMN_1353986 52.52 A
ILMN_1366832 54.7 A
ILMN_1366017 51.6 A
ILMN_1354115 51.63 A
ILMN_1356225 57.03 A
ILMN_1373889 53.09 A
ILMN_1372047 61.18 A
ILMN_1372803 52.66 A
ILMN_1369380 57.64 A
ILMN_1366418 69.39 P
ILMN_1349281 199.32 P
ILMN_1354519 52.41 A
ILMN_1363384 58.29 A
ILMN_1373604 46.21 A
ILMN_1356361 75.65 P

Total number of rows: 22517

Table truncated, full table size 463 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap