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GEO accession:
Sample GSM3101754
Query DataSets for GSM3101754
Status
Public on Jan 01, 2020
Title
SLB-1_DMSO_16h_rep1
Sample type
RNA
Source name
Cultured_DMSO
Organism
Homo sapiens
Characteristics
cell line: SLB1
treatment: DMSO 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
17.46285
TC0100006476.hg.1
67.17317
TC0100006479.hg.1
88.91681
TC0100006480.hg.1
21.98052
TC0100006483.hg.1
200.0181
TC0100006486.hg.1
246.758
TC0100006490.hg.1
58.31874
TC0100006492.hg.1
35.6725
TC0100006494.hg.1
526.6838
TC0100006497.hg.1
18.85766
TC0100006499.hg.1
88.2839
TC0100006501.hg.1
116.4671
TC0100006502.hg.1
23.87234
TC0100006514.hg.1
11.97971
TC0100006516.hg.1
43.21911
TC0100006517.hg.1
16.93402
TC0100006524.hg.1
26.28495
TC0100006540.hg.1
47.58387
TC0100006548.hg.1
15.48109
TC0100006550.hg.1
68.95595
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101754_SLB1-1.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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