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GEO accession:
Sample GSM3101759
Query DataSets for GSM3101759
Status
Public on Jan 01, 2020
Title
SLB-1_MK-2048_25uM_16h_rep3
Sample type
RNA
Source name
Cultured_MK-2048_25uM
Organism
Homo sapiens
Characteristics
cell line: SLB1
treatment: MK-2048 25uM 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
17.81294
TC0100006476.hg.1
82.08374
TC0100006479.hg.1
53.38301
TC0100006480.hg.1
16.75063
TC0100006483.hg.1
383.8306
TC0100006486.hg.1
104.0676
TC0100006490.hg.1
50.21878
TC0100006492.hg.1
34.21214
TC0100006494.hg.1
442.7177
TC0100006497.hg.1
21.23073
TC0100006499.hg.1
105.4848
TC0100006501.hg.1
104.172
TC0100006502.hg.1
25.98792
TC0100006514.hg.1
11.65508
TC0100006516.hg.1
30.31497
TC0100006517.hg.1
11.56854
TC0100006524.hg.1
19.32291
TC0100006540.hg.1
91.59347
TC0100006548.hg.1
15.7118
TC0100006550.hg.1
70.33002
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101759_SLB1+MK-3.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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