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GEO accession:
Sample GSM3101760
Query DataSets for GSM3101760
Status
Public on Jan 01, 2020
Title
KK1_DMSO_16h_rep1
Sample type
RNA
Source name
Cultured_DMSO
Organism
Homo sapiens
Characteristics
cell line: KK1
treatment: DMSO 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
25.79245
TC0100006476.hg.1
21.37421
TC0100006479.hg.1
164.9868
TC0100006480.hg.1
51.69067
TC0100006483.hg.1
27.19297
TC0100006486.hg.1
75.29931
TC0100006490.hg.1
31.49965
TC0100006492.hg.1
34.30431
TC0100006494.hg.1
608.7038
TC0100006497.hg.1
18.09363
TC0100006499.hg.1
115.8566
TC0100006501.hg.1
180.916
TC0100006502.hg.1
11.35279
TC0100006514.hg.1
8.03896
TC0100006516.hg.1
24.65433
TC0100006517.hg.1
41.31153
TC0100006524.hg.1
26.15139
TC0100006540.hg.1
71.67387
TC0100006548.hg.1
15.46484
TC0100006550.hg.1
2079.304
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101760_KK1-1.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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