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GEO accession:
Sample GSM3101765
Query DataSets for GSM3101765
Status
Public on Jan 01, 2020
Title
KK1_MK-2048_25uM_16h_rep3
Sample type
RNA
Source name
Cultured_MK-2048_25uM
Organism
Homo sapiens
Characteristics
cell line: KK1
treatment: MK-2048 25uM 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
23.83124
TC0100006476.hg.1
38.70194
TC0100006479.hg.1
176.6298
TC0100006480.hg.1
57.71342
TC0100006483.hg.1
39.15735
TC0100006486.hg.1
89.18123
TC0100006490.hg.1
37.46164
TC0100006492.hg.1
34.35015
TC0100006494.hg.1
445.3005
TC0100006497.hg.1
13.02953
TC0100006499.hg.1
139.8603
TC0100006501.hg.1
175.3803
TC0100006502.hg.1
18.09979
TC0100006514.hg.1
8.68193
TC0100006516.hg.1
24.56459
TC0100006517.hg.1
44.97599
TC0100006524.hg.1
26.30835
TC0100006540.hg.1
51.71569
TC0100006548.hg.1
22.07377
TC0100006550.hg.1
2509.611
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101765_KK1+MK-3.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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