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GEO accession:
Sample GSM3101766
Query DataSets for GSM3101766
Status
Public on Jan 01, 2020
Title
ED_DMSO_16h_rep1
Sample type
RNA
Source name
Cultured_DMSO
Organism
Homo sapiens
Characteristics
cell line: ED
treatment: DMSO 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
13.47768
TC0100006476.hg.1
63.4954
TC0100006479.hg.1
316.8077
TC0100006480.hg.1
39.75184
TC0100006483.hg.1
80.39133
TC0100006486.hg.1
84.98702
TC0100006490.hg.1
40.57598
TC0100006492.hg.1
27.73577
TC0100006494.hg.1
816.0032
TC0100006497.hg.1
15.08354
TC0100006499.hg.1
692.8144
TC0100006501.hg.1
854.4213
TC0100006502.hg.1
16.46177
TC0100006514.hg.1
12.72769
TC0100006516.hg.1
35.82997
TC0100006517.hg.1
15.38394
TC0100006524.hg.1
29.80384
TC0100006540.hg.1
35.70159
TC0100006548.hg.1
15.79445
TC0100006550.hg.1
57.56722
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101766_ED-1.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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