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GEO accession:
Sample GSM3101767
Query DataSets for GSM3101767
Status
Public on Jan 01, 2020
Title
ED_DMSO_16h_rep2
Sample type
RNA
Source name
Cultured_DMSO
Organism
Homo sapiens
Characteristics
cell line: ED
treatment: DMSO 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
15.36988
TC0100006476.hg.1
59.56023
TC0100006479.hg.1
247.2449
TC0100006480.hg.1
40.97425
TC0100006483.hg.1
57.85234
TC0100006486.hg.1
56.06636
TC0100006490.hg.1
42.30482
TC0100006492.hg.1
31.88012
TC0100006494.hg.1
768.1088
TC0100006497.hg.1
17.87108
TC0100006499.hg.1
506.5839
TC0100006501.hg.1
669.9497
TC0100006502.hg.1
22.17744
TC0100006514.hg.1
11.19492
TC0100006516.hg.1
26.93973
TC0100006517.hg.1
11.56375
TC0100006524.hg.1
21.55192
TC0100006540.hg.1
40.38858
TC0100006548.hg.1
12.86374
TC0100006550.hg.1
60.05918
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101767_ED-2.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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