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GEO accession:
Sample GSM3101768
Query DataSets for GSM3101768
Status
Public on Jan 01, 2020
Title
ED_DMSO_16h_rep3
Sample type
RNA
Source name
Cultured_DMSO
Organism
Homo sapiens
Characteristics
cell line: ED
treatment: DMSO 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
15.27841
TC0100006476.hg.1
52.97617
TC0100006479.hg.1
313.9753
TC0100006480.hg.1
48.75364
TC0100006483.hg.1
80.59341
TC0100006486.hg.1
62.24099
TC0100006490.hg.1
42.97367
TC0100006492.hg.1
24.71212
TC0100006494.hg.1
677.3779
TC0100006497.hg.1
16.63886
TC0100006499.hg.1
589.4311
TC0100006501.hg.1
718.0198
TC0100006502.hg.1
22.70853
TC0100006514.hg.1
11.45866
TC0100006516.hg.1
32.39836
TC0100006517.hg.1
10.81907
TC0100006524.hg.1
34.09373
TC0100006540.hg.1
37.35415
TC0100006548.hg.1
15.62837
TC0100006550.hg.1
55.40512
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101768_ED-3.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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