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Sample GSM3101768 Query DataSets for GSM3101768
Status Public on Jan 01, 2020
Title ED_DMSO_16h_rep3
Sample type RNA
 
Source name Cultured_DMSO
Organism Homo sapiens
Characteristics cell line: ED
treatment: DMSO 16h
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit
Label biotin
Label protocol We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
 
Hybridization protocol We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
 
Submission date Apr 17, 2018
Last update date Jan 01, 2020
Contact name Emi Ikebe
Organization name National Institute of Infectious Diseases
Street address 4-7-1, Gakuen
City Musashimurayama-shi
State/province Tokyo
ZIP/Postal code 208-0011
Country Japan
 
Platform ID GPL23159
Series (1)
GSE113265 Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells

Data table header descriptions
ID_REF
VALUE Normalized intensity.

Data table
ID_REF VALUE
TC0100006437.hg.1 15.27841
TC0100006476.hg.1 52.97617
TC0100006479.hg.1 313.9753
TC0100006480.hg.1 48.75364
TC0100006483.hg.1 80.59341
TC0100006486.hg.1 62.24099
TC0100006490.hg.1 42.97367
TC0100006492.hg.1 24.71212
TC0100006494.hg.1 677.3779
TC0100006497.hg.1 16.63886
TC0100006499.hg.1 589.4311
TC0100006501.hg.1 718.0198
TC0100006502.hg.1 22.70853
TC0100006514.hg.1 11.45866
TC0100006516.hg.1 32.39836
TC0100006517.hg.1 10.81907
TC0100006524.hg.1 34.09373
TC0100006540.hg.1 37.35415
TC0100006548.hg.1 15.62837
TC0100006550.hg.1 55.40512

Total number of rows: 24351

Table truncated, full table size 658 Kbytes.




Supplementary file Size Download File type/resource
GSM3101768_ED-3.CEL.gz 1.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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