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GEO accession:
Sample GSM3101777
Query DataSets for GSM3101777
Status
Public on Jan 01, 2020
Title
OATL4_MK-2048_25uM_16h_rep3
Sample type
RNA
Source name
Cultured_MK-2048_25uM
Organism
Homo sapiens
Characteristics
cell line: OATL4
treatment: MK-2048 25uM 16h
Extracted molecule
total RNA
Extraction protocol
RNeasy Mini Kit
Label
biotin
Label protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Hybridization protocol
We followed protocol of manual that is GeneChip® WT PLUS Reagent Kit User Manual.
Scan protocol
We followed manufacturer's protocol, and used GeneChip® Scanner 3000 7G.
Data processing
Data acquisition and normalization (SST-RMA) were used Affymetrix® Expression Console™ Software.
Submission date
Apr 17, 2018
Last update date
Jan 01, 2020
Contact name
Emi Ikebe
Organization name
National Institute of Infectious Diseases
Street address
4-7-1, Gakuen
City
Musashimurayama-shi
State/province
Tokyo
ZIP/Postal code
208-0011
Country
Japan
Platform ID
GPL23159
Series (1)
GSE113265
Molecular targets of HIV integrase inhibitor, MK-2048, on ATL cells
Data table header descriptions
ID_REF
VALUE
Normalized intensity.
Data table
ID_REF
VALUE
TC0100006437.hg.1
25.42498
TC0100006476.hg.1
60.8306
TC0100006479.hg.1
150.7773
TC0100006480.hg.1
32.22221
TC0100006483.hg.1
60.14161
TC0100006486.hg.1
394.7264
TC0100006490.hg.1
73.33545
TC0100006492.hg.1
68.57903
TC0100006494.hg.1
512.7617
TC0100006497.hg.1
13.56737
TC0100006499.hg.1
221.5552
TC0100006501.hg.1
267.2894
TC0100006502.hg.1
25.29948
TC0100006514.hg.1
11.41576
TC0100006516.hg.1
29.38429
TC0100006517.hg.1
16.83322
TC0100006524.hg.1
25.00298
TC0100006540.hg.1
63.07554
TC0100006548.hg.1
11.51945
TC0100006550.hg.1
87.1077
Total number of rows:
24351
Table truncated, full table size
658 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3101777_OATL4+MK-3.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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