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Sample GSM3154278 Query DataSets for GSM3154278
Status Public on May 24, 2021
Title Renal MSC sample #2
Sample type RNA
 
Source name Mouse renal MSC
Organism Mus musculus
Characteristics strain: C57BL6
genotype/variation: Ren1c YFP
cell type: renal MSC
Growth protocol Mouse renal MSC groth in DMEM 10% FBS
Extracted molecule total RNA
Extraction protocol Picopure Arcturus RNA isolation
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100 ng total RNA following Affymetrix recommended protocol.
 
Hybridization protocol Hybridization protocol was preformed as recommended by Affimetrix for the Mosue 430 2.0 microarray chip
Scan protocol GeneChips were scanned using the GeneChip™ Scanner 3000 7G System
Description Data expression of MSC isolated from adult C57BL6 Ren1c YFP mice
Data processing Data was processed using dChip
 
Submission date May 24, 2018
Last update date May 24, 2021
Contact name Jose A Gomez
E-mail(s) jose.a.gomez@vanderbilt.edu
Phone 615-322-3332
Organization name Vanderbilt University Medical Center
Department Medicine
Lab Gomez
Street address 2220 Pierce Ave, 502 RRB
City Nashville
State/province Tennessee
ZIP/Postal code 37205
Country USA
 
Platform ID GPL1261
Series (1)
GSE114903 RenalMSCvsJGcells_MouseMicroarray

Data table header descriptions
ID_REF
VALUE dChip normalized
RenalMSC_Mouse430+2_2 Call

Data table
ID_REF VALUE RenalMSC_Mouse430+2_2 Call
1415670_at 1156.57 P
1415671_at 1350.13 P
1415672_at 1535.59 P
1415673_at 650.45 P
1415674_a_at 460.48 P
1415675_at 533.38 P
1415676_a_at 539.26 P
1415677_at 474.3 P
1415678_at 558.94 P
1415679_at 1126.9 P
1415680_at 115.19 P
1415681_at 465.97 P
1415682_at 251.81 P
1415683_at 726.3 P
1415684_at 49.6 P
1415685_at 123.36 P
1415686_at 1263.8 P
1415687_a_at 5270.35 P
1415688_at 414.27 P
1415689_s_at 209.73 P

Total number of rows: 45037

Table truncated, full table size 847 Kbytes.




Supplementary file Size Download File type/resource
GSM3154278_RenalMSC_Mouse430+2_2.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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