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Sample GSM3172796 Query DataSets for GSM3172796
Status Public on Dec 31, 2018
Title normal colon, replicate 7
Sample type RNA
 
Source name normal colon tissue
Organism Homo sapiens
Characteristics disease: normal
Treatment protocol no treatment
Growth protocol no culture
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Affymetrix WT plus kit
 
Hybridization protocol Clariom D array
Scan protocol Affymetrix Model 450 Fluidics Station and Affymetrix Model 3000 7G
Description Gene expression data from normal colon tissue
Data processing Expression Console software (Affymetrix)
 
Submission date Jun 04, 2018
Last update date Dec 31, 2018
Contact name bin zhang
E-mail(s) zhangbin@picb.ac.cn
Phone (65)96100417
Organization name National University of Singapore
Department Cancer Science Institute of Singapore
Street address 14 Medical Drive, #12-01
City Singapore
ZIP/Postal code 117599
Country Singapore
 
Platform ID GPL23126
Series (1)
GSE115261 Expression data of colon adenocarcinoma and normal colon

Data table header descriptions
ID_REF
VALUE log2-sst-rma-gene-full

Data table
ID_REF VALUE
AFFX-BkGr-GC03_st 9.67936
AFFX-BkGr-GC04_st 8.21395
AFFX-BkGr-GC05_st 7.18957
AFFX-BkGr-GC06_st 6.65228
AFFX-BkGr-GC07_st 5.79932
AFFX-BkGr-GC08_st 4.80037
AFFX-BkGr-GC09_st 4.10242
AFFX-BkGr-GC10_st 3.78477
AFFX-BkGr-GC11_st 3.40198
AFFX-BkGr-GC12_st 3.09641
AFFX-BkGr-GC13_st 2.82431
AFFX-BkGr-GC14_st 2.61543
AFFX-BkGr-GC15_st 2.50869
AFFX-BkGr-GC16_st 2.53591
AFFX-BkGr-GC17_st 2.49426
AFFX-BkGr-GC18_st 2.60044
AFFX-BkGr-GC19_st 2.75343
AFFX-BkGr-GC20_st 2.79765
AFFX-BkGr-GC21_st 2.88089
AFFX-BkGr-GC22_st 3.24794

Total number of rows: 138745

Table truncated, full table size 3533 Kbytes.




Supplementary file Size Download File type/resource
GSM3172796_N7_Clariom_D_Human_.CEL.gz 22.7 Mb (ftp)(http) CEL
GSM3172796_N7_Clariom_D_Human_.sst-rma-gene-full.chp.gz 888.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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