|
Status |
Public on Jun 22, 2021 |
Title |
Arc-pos_migDC_rep1 |
Sample type |
SRA |
|
|
Source name |
Arc-pos_migDC
|
Organism |
Mus musculus |
Characteristics |
strain: Arc/Arg3.1-eGFP mice tissue: skin draining lymph nodes cell type: migratory dendritic cells (migDC) cell subtype: Arc/Arg3.1-eGFP-positive
|
Extracted molecule |
total RNA |
Extraction protocol |
Qiagen RNeasy Micro Kit NEBNext UltraTM RNA Library Prep Kit for Illumina (New England Biolabs)
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
Illumina HiSeq 4000 |
|
|
Description |
p205sT1-4-GFP-pos_Broder_S16_L003
|
Data processing |
STAR aligment Counting by featureCounts DESeq2 analysis Genome_build: mm10 Supplementary_files_format_and_content: raw ir normalized gene counts
|
|
|
Submission date |
Jun 22, 2018 |
Last update date |
Jun 22, 2021 |
Contact name |
Manuel A Friese |
E-mail(s) |
manuel.friese@zmnh.uni-hamburg.de
|
Organization name |
Universitätsklinikum Hamburg-Eppendorf
|
Department |
Institut für Neuroimmunologie und Multiple Sklerose
|
Street address |
Falkenried 94
|
City |
Hamburg |
ZIP/Postal code |
20251 |
Country |
Germany |
|
|
Platform ID |
GPL21103 |
Series (1) |
GSE116161 |
RNA-seq of Arc/Arg3.1-positive versus Arc/Arg3.1-negative skin migratory dendritic cells from healthy mice |
|
Relations |
BioSample |
SAMN09470236 |
SRA |
SRX4283571 |