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GEO accession:
Sample GSM3242
Query DataSets for GSM3242
Status
Public on Dec 17, 2002
Title
NS
Sample type
SAGE
Anchor
NlaIII
Tag Count
37292
Tag Length
10
Source name
normal skin pooled from 3 breast reductions
Organism
Homo sapiens
Extracted molecule
total RNA
Description
SAGE library generated from pooled normal skin from three different breast reduction patients.
Submission date
Dec 17, 2002
Last update date
Nov 19, 2008
Contact name
Antoinette van der Kuyl
E-mail(s)
a.c.vanderkuyl@amc.uva.nl
Phone
31 20 5666778
Organization name
Academic Medical Centre, University of Amsterdam
Department
Human Retrovirology
Street address
City
Amsterdam
ZIP/Postal code
1105 AZ
Country
Netherlands
Platform ID
GPL4
Series (1)
GSE514
AIDS-related Kaposi's sarcoma
Data table header descriptions
TAG
10 nt SAGE tag sequence
COUNT
number of times tag is found in SAGE library
TPM
tags per million
Data table
TAG
COUNT
TPM
CCACTGCACT
418
11208.84
CCCATCGTCC
274
7347.42
CCTGTAATCC
233
6247.99
GTGAAACCCC
221
5926.20
CACCTAATTG
183
4907.22
GCCCCTGCTG
173
4639.06
GGGCTGGGGT
169
4531.80
TGCACGTTTT
165
4424.54
GGCCACGTAG
164
4397.73
TAGGTTGTCT
153
4102.76
TTGGCCAGGC
143
3834.60
GGATTTGGCC
142
3807.79
TTGGTCCTCT
132
3539.63
ACCAAAAACC
125
3351.93
CGCCGCCGGC
123
3298.29
GAGGGAGTTT
120
3217.85
AGCCCTACAA
119
3191.03
AACCCGGGAG
112
3003.33
GCAGCCATCC
111
2976.51
GTGAAACCCT
106
2842.43
Total number of rows:
15316
Table truncated, full table size
286 Kbytes
.
Supplementary data files not provided
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