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Sample GSM326633 Query DataSets for GSM326633
Status Public on Dec 30, 2008
Title E8.25 4-6s definitive endoderm 1
Sample type RNA
 
Source name E8.25 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 244.9256 31 6.425712 0
ILMN_2707227 43.47454 33 3.667665 0.02005013
ILMN_2896528 1792.439 50 38.15361 0
ILMN_2721178 222.1004 30 9.895098 0
ILMN_1227723 234.5817 42 7.325093 0
ILMN_3033922 79.08889 52 4.058313 0
ILMN_3092673 521.3727 37 16.53415 0
ILMN_2730714 1645.574 40 41.01782 0
ILMN_3162224 1694.909 33 41.75902 0
ILMN_2816356 80.24194 29 4.776458 0
ILMN_2808939 629.6841 38 16.12538 0
ILMN_2634564 357.1262 33 17.57347 0
ILMN_1216623 522.1069 46 16.45518 0
ILMN_1215157 680.3183 38 16.12731 0
ILMN_1228777 30.67361 57 2.289877 0.4335839
ILMN_2737647 26.39158 46 3.021312 0.7318296
ILMN_1216425 31.53782 54 2.254046 0.3872181
ILMN_2734484 211.6452 38 9.59021 0
ILMN_2652961 28.60539 47 2.702118 0.5914787
ILMN_2952292 77.94069 39 4.702868 0

Total number of rows: 25697

Table truncated, full table size 1030 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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