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Sample GSM326635 Query DataSets for GSM326635
Status Public on Dec 30, 2008
Title E8.25 4-6s definitive endoderm 3
Sample type RNA
 
Source name E8.25 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 286.5698 35 9.921725 0
ILMN_2707227 39.41645 40 2.131123 0.03634085
ILMN_2896528 1733.156 52 32.6496 0
ILMN_2721178 191.3657 42 6.137091 0
ILMN_1227723 184.5147 44 6.051972 0
ILMN_3033922 69.16142 36 4.233746 0.001253133
ILMN_3092673 549.5578 39 15.76906 0
ILMN_2730714 1470.594 51 31.1525 0
ILMN_3162224 1382.559 45 31.76615 0
ILMN_2816356 126.1969 38 5.267788 0
ILMN_2808939 666.333 38 21.44141 0
ILMN_2634564 307.2167 35 14.9531 0
ILMN_1216623 464.4275 36 14.33236 0
ILMN_1215157 603.7749 43 18.84307 0
ILMN_1228777 29.94693 28 2.683866 0.4498747
ILMN_2737647 30.61943 31 2.410318 0.3872181
ILMN_1216425 31.56594 35 2.411029 0.3170426
ILMN_2734484 260.7561 49 10.4339 0
ILMN_2652961 28.65254 35 2.439683 0.5789474
ILMN_2952292 63.35823 44 2.953384 0.001253133

Total number of rows: 25697

Table truncated, full table size 1038 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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