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Sample GSM326636 Query DataSets for GSM326636
Status Public on Dec 30, 2008
Title E8.25 4-6s ectoderm 1
Sample type RNA
 
Source name E8.25 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 61.11391 43 4.188393 0.001253133
ILMN_2707227 40.94596 43 2.322116 0.0989975
ILMN_2896528 1866.519 47 37.38901 0
ILMN_2721178 208.676 40 8.638453 0
ILMN_1227723 197.9549 43 5.839087 0
ILMN_3033922 76.99319 41 3.670594 0
ILMN_3092673 715.1972 36 19.1018 0
ILMN_2730714 1743.639 43 45.77137 0
ILMN_3162224 2045.627 47 47.39753 0
ILMN_2816356 80.29731 36 4.785752 0
ILMN_2808939 621.3355 46 19.00166 0
ILMN_2634564 360.4764 30 19.26152 0
ILMN_1216623 516.027 44 15.94442 0
ILMN_1215157 638.67 35 20.41881 0
ILMN_1228777 26.34553 34 2.033234 0.9473684
ILMN_2737647 39.54958 31 2.948829 0.1491228
ILMN_1216425 30.50826 54 1.940078 0.7268171
ILMN_2734484 280.527 40 8.845369 0
ILMN_2652961 36.53798 34 2.364665 0.2756892
ILMN_2952292 82.91624 32 2.924378 0

Total number of rows: 25697

Table truncated, full table size 1029 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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