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Sample GSM326638 Query DataSets for GSM326638
Status Public on Dec 30, 2008
Title E8.25 4-6s ectoderm 3
Sample type RNA
 
Source name E8.25 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 54.41865 45 2.980617 0.002506266
ILMN_2707227 38.68405 47 2.69628 0.0914787
ILMN_2896528 2185.042 38 66.25964 0
ILMN_2721178 279.8974 47 8.259098 0
ILMN_1227723 186.993 40 5.525048 0
ILMN_3033922 94.75933 40 3.868413 0
ILMN_3092673 694.2949 42 11.81801 0
ILMN_2730714 1594.69 44 44.13202 0
ILMN_3162224 2251.108 53 41.89247 0
ILMN_2816356 107.539 39 5.121049 0
ILMN_2808939 532.044 27 17.32139 0
ILMN_2634564 348.7862 27 19.29776 0
ILMN_1216623 519.6378 40 18.44633 0
ILMN_1215157 687.6375 41 18.32857 0
ILMN_1228777 28.17096 32 2.791608 0.7243108
ILMN_2737647 34.11522 41 1.936838 0.2431078
ILMN_1216425 32.92165 42 2.076791 0.3283208
ILMN_2734484 357.5477 35 12.07351 0
ILMN_2652961 35.43631 44 2.504504 0.1867168
ILMN_2952292 65.67966 35 2.554142 0

Total number of rows: 25697

Table truncated, full table size 1024 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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