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Sample GSM326642 Query DataSets for GSM326642
Status Public on Dec 30, 2008
Title E11.5 esophagus endoderm 1
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 682.5393 31 13.74176 0
ILMN_2707227 32.99745 34 2.364578 0.02380952
ILMN_2896528 2985.899 40 56.56926 0
ILMN_2721178 352.2831 47 8.896955 0
ILMN_1227723 156.56 44 5.038931 0
ILMN_3033922 197.4083 42 7.347406 0
ILMN_3092673 1335.17 45 25.06383 0
ILMN_2730714 1347.998 37 27.79484 0
ILMN_3162224 1340.664 43 31.82389 0
ILMN_2816356 53.22248 42 3.008417 0
ILMN_2808939 650.4186 44 13.97168 0
ILMN_2634564 348.8407 38 16.82552 0
ILMN_1216623 522.2 41 16.55215 0
ILMN_1215157 663.8069 43 17.07891 0
ILMN_1228777 21.00165 35 2.360279 0.4511278
ILMN_2737647 24.25593 34 2.618292 0.2030075
ILMN_1216425 21.07957 40 2.025234 0.4486215
ILMN_2734484 493.0856 37 12.07684 0
ILMN_2652961 19.45832 37 1.997664 0.5864662
ILMN_2952292 69.75089 50 3.545692 0

Total number of rows: 25697

Table truncated, full table size 1020 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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