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Sample GSM326643 Query DataSets for GSM326643
Status Public on Dec 30, 2008
Title E11.5 esophagus endoderm 2
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 808.0038 37 20.19014 0
ILMN_2707227 26.58671 44 2.01273 0.1177945
ILMN_2896528 2971.644 53 55.18714 0
ILMN_2721178 348.7541 45 11.19458 0
ILMN_1227723 180.127 41 8.527221 0
ILMN_3033922 190.4219 49 6.9782 0
ILMN_3092673 1380.245 40 32.54921 0
ILMN_2730714 1600.141 41 31.44351 0
ILMN_3162224 1580.312 53 29.3244 0
ILMN_2816356 56.45326 40 4.256682 0
ILMN_2808939 757.1704 37 19.80795 0
ILMN_2634564 377.2469 39 19.50497 0
ILMN_1216623 554.6612 32 20.63469 0
ILMN_1215157 743.3301 52 17.34454 0
ILMN_1228777 23.92129 45 2.161283 0.2218045
ILMN_2737647 18.14315 25 2.474369 0.7067669
ILMN_1216425 17.92908 52 2.093336 0.7192982
ILMN_2734484 745.5566 42 31.07698 0
ILMN_2652961 20.64723 46 1.867069 0.4749373
ILMN_2952292 72.6694 31 4.029253 0

Total number of rows: 25697

Table truncated, full table size 1024 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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