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Sample GSM326644 Query DataSets for GSM326644
Status Public on Dec 30, 2008
Title E11.5 esophagus endoderm 3
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 332.0872 32 15.04053 0
ILMN_2707227 23.03415 40 2.759957 0.07894737
ILMN_2896528 3116.966 45 61.70647 0
ILMN_2721178 515.9496 50 18.0997 0
ILMN_1227723 144.6003 33 9.13813 0
ILMN_3033922 245.4981 46 9.366709 0
ILMN_3092673 1194.819 43 21.85868 0
ILMN_2730714 1424.436 44 31.56672 0
ILMN_3162224 1416 46 41.32924 0
ILMN_2816356 59.71 45 4.749524 0
ILMN_2808939 652.3778 41 19.6529 0
ILMN_2634564 361.0076 40 17.58213 0
ILMN_1216623 546.1096 50 17.77237 0
ILMN_1215157 760.5011 38 26.32785 0
ILMN_1228777 9.637815 39 2.004752 0.7994987
ILMN_2737647 17.37955 40 2.820629 0.3045113
ILMN_1216425 15.28991 48 2.305477 0.4310777
ILMN_2734484 597.2307 44 18.90347 0
ILMN_2652961 20.42965 35 3.54088 0.1578947
ILMN_2952292 74.26395 43 4.875247 0

Total number of rows: 25697

Table truncated, full table size 1014 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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