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Sample GSM326646 Query DataSets for GSM326646
Status Public on Dec 30, 2008
Title E11.5 lung endoderm 2
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 63.83342 39 3.935166 0.001253133
ILMN_2707227 35.79649 42 3.575444 0.08521304
ILMN_2896528 3159.375 48 93.81181 0
ILMN_2721178 682.3347 49 19.82364 0
ILMN_1227723 174.2973 34 7.775422 0
ILMN_3033922 353.6324 55 9.41185 0
ILMN_3092673 1328.026 50 31.70229 0
ILMN_2730714 1606.823 59 40.02134 0
ILMN_3162224 1477.806 40 57.32219 0
ILMN_2816356 49.56409 33 4.724898 0.007518797
ILMN_2808939 745.0455 34 20.18727 0
ILMN_2634564 500.2804 25 31.05493 0
ILMN_1216623 718.6606 41 19.23645 0
ILMN_1215157 876.8221 39 24.55849 0
ILMN_1228777 19.699 34 2.385761 0.8345864
ILMN_2737647 33.78121 38 2.960613 0.1177945
ILMN_1216425 28.45835 30 3.211576 0.3120301
ILMN_2734484 279.6502 32 17.38598 0
ILMN_2652961 25.65235 43 2.72366 0.4674186
ILMN_2952292 99.60747 53 4.543787 0

Total number of rows: 25697

Table truncated, full table size 1029 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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