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Sample GSM326648 Query DataSets for GSM326648
Status Public on Dec 30, 2008
Title E11.5 stomach endoderm 1
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 278.2727 32 11.79606 0
ILMN_2707227 31.53917 42 2.545307 0.03884712
ILMN_2896528 2689.407 40 98.13064 0
ILMN_2721178 416.4292 44 16.17784 0
ILMN_1227723 144.817 43 7.126918 0
ILMN_3033922 220.6578 39 12.02707 0
ILMN_3092673 1114.609 55 32.90558 0
ILMN_2730714 1318.03 45 44.38435 0
ILMN_3162224 1359.555 33 60.63594 0
ILMN_2816356 92.10674 34 5.649314 0
ILMN_2808939 690.1903 44 26.71172 0
ILMN_2634564 407.2425 32 22.01111 0
ILMN_1216623 493.7072 43 22.59973 0
ILMN_1215157 574.9474 46 23.78843 0
ILMN_1228777 9.753098 36 1.718253 0.6629072
ILMN_2737647 16.49205 31 1.848459 0.2794486
ILMN_1216425 7.209506 51 1.445768 0.8984963
ILMN_2734484 525.0619 40 25.72304 0
ILMN_2652961 6.784237 41 1.59531 0.9273183
ILMN_2952292 37.39717 48 2.625377 0.01879699

Total number of rows: 25697

Table truncated, full table size 1024 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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