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Sample GSM326649 Query DataSets for GSM326649
Status Public on Dec 30, 2008
Title E11.5 stomach endoderm 2
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 405.5606 38 9.605358 0
ILMN_2707227 37.24226 32 4.085386 0.02380952
ILMN_2896528 2957.075 36 63.75124 0
ILMN_2721178 647.9705 54 16.7145 0
ILMN_1227723 144.0899 33 7.075999 0
ILMN_3033922 400.5578 47 14.21293 0
ILMN_3092673 1569.765 45 37.14685 0
ILMN_2730714 1917.22 42 42.1241 0
ILMN_3162224 1828.271 40 47.06063 0
ILMN_2816356 55.95275 32 6.08053 0.001253133
ILMN_2808939 783.9406 49 25.22889 0
ILMN_2634564 435.1314 38 17.44533 0
ILMN_1216623 602.0735 38 13.33771 0
ILMN_1215157 825.0964 36 31.49895 0
ILMN_1228777 19.72474 40 2.87807 0.5451128
ILMN_2737647 26.58734 38 3.614518 0.1754386
ILMN_1216425 23.25351 51 2.352574 0.3220551
ILMN_2734484 325.583 35 15.94248 0
ILMN_2652961 22.3235 45 3.047597 0.3609022
ILMN_2952292 82.21502 47 3.664898 0

Total number of rows: 25697

Table truncated, full table size 1030 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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