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Sample GSM326650 Query DataSets for GSM326650
Status Public on Dec 30, 2008
Title E11.5 stomach endoderm 3
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 354.7604 29 9.874808 0
ILMN_2707227 34.11311 41 2.458923 0.08646616
ILMN_2896528 3384.894 38 96.85585 0
ILMN_2721178 702.7928 46 17.59686 0
ILMN_1227723 165.1865 39 7.945178 0
ILMN_3033922 328.1114 39 12.02699 0
ILMN_3092673 1339.511 50 28.30396 0
ILMN_2730714 1724.396 33 42.9893 0
ILMN_3162224 1838.195 32 62.83825 0
ILMN_2816356 38.38975 35 2.770469 0.03508772
ILMN_2808939 785.9742 25 36.85976 0
ILMN_2634564 466.5233 34 26.97383 0
ILMN_1216623 596.8787 30 16.51322 0
ILMN_1215157 795.9886 48 19.7734 0
ILMN_1228777 21.88895 56 1.976289 0.7055138
ILMN_2737647 22.58774 34 2.627559 0.6478696
ILMN_1216425 23.03782 43 1.906199 0.6090226
ILMN_2734484 255.2672 55 8.821086 0
ILMN_2652961 21.18101 43 2.405748 0.7706767
ILMN_2952292 88.51146 52 3.21179 0

Total number of rows: 25697

Table truncated, full table size 1027 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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