NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM326653 Query DataSets for GSM326653
Status Public on Dec 30, 2008
Title E11.5 liver endoderm 3
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 -1.775864 37 0.780304 0.9711779
ILMN_2707227 20.60153 26 2.926815 0.06641604
ILMN_2896528 2416.196 50 79.51939 0
ILMN_2721178 419.1261 34 14.69259 0
ILMN_1227723 124.5558 47 6.940591 0
ILMN_3033922 415.367 39 23.70207 0
ILMN_3092673 1582.63 41 45.43776 0
ILMN_2730714 2265.157 46 62.11746 0
ILMN_3162224 1515.832 47 23.21811 0
ILMN_2816356 84.58748 45 5.721869 0.002506266
ILMN_2808939 1675.505 36 55.2823 0
ILMN_2634564 279.8089 42 20.25593 0
ILMN_1216623 332.889 37 13.02694 0
ILMN_1215157 463.3761 46 14.5143 0
ILMN_1228777 0.0255195 36 1.072144 0.8558897
ILMN_2737647 5.835565 37 1.143186 0.3972431
ILMN_1216425 1.472942 35 1.518641 0.7205514
ILMN_2734484 406.3086 47 19.74251 0
ILMN_2652961 1.404948 39 1.148794 0.7243108
ILMN_2952292 23.88895 55 2.097514 0.04385965

Total number of rows: 25697

Table truncated, full table size 1045 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap