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Sample GSM326659 Query DataSets for GSM326659
Status Public on Dec 30, 2008
Title E11.5 intestinal endoderm 2
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 123.9755 38 6.412142 0
ILMN_2707227 46.76608 35 5.378974 0.05012531
ILMN_2896528 2976.835 51 72.60395 0
ILMN_2721178 420.3265 47 14.71493 0
ILMN_1227723 190.2003 38 7.037207 0
ILMN_3033922 218.0145 38 9.762291 0
ILMN_3092673 1722.47 45 57.67705 0
ILMN_2730714 1952.051 52 47.94886 0
ILMN_3162224 1885.668 41 52.86274 0
ILMN_2816356 58.94419 41 5.307193 0.01754386
ILMN_2808939 709.981 37 16.35276 0
ILMN_2634564 398.3039 44 18.98282 0
ILMN_1216623 567.5983 33 18.49837 0
ILMN_1215157 692.0656 52 18.07346 0
ILMN_1228777 17.42539 40 4.270594 0.6378446
ILMN_2737647 35.45031 50 3.628865 0.1265664
ILMN_1216425 22.0882 39 4.17589 0.3897243
ILMN_2734484 296.9652 50 11.19174 0
ILMN_2652961 13.58387 38 3.410036 0.8007519
ILMN_2952292 81.23365 45 3.282093 0.001253133

Total number of rows: 25697

Table truncated, full table size 1038 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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