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Sample GSM326660 Query DataSets for GSM326660
Status Public on Dec 30, 2008
Title E11.5 intestinal endoderm 3
Sample type RNA
 
Source name E11.5 mouse embryo
Organism Mus musculus
Characteristics ICR
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen)
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Illumina BeadStation (Illumina)
Scan protocol Illumina BeadStation (Illumina)
Description Illumina TotalPrep RNA Amplification kit
Data processing Illumina BeadStudio (Illumina); rank invariant normalization, background subtraction using Illumina BeadStudio (Illumina)
 
Submission date Oct 03, 2008
Last update date Dec 30, 2008
Contact name Richard Sherwood
E-mail(s) rsherw@fas.harvard.edu
Organization name Harvard University
Department Department of Molecular and Cellular Biology
Lab Douglas Melton
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE13040 E11.5 Mouse Endodermal Organ Gene Expression

Data table header descriptions
ID_REF
VALUE AVG Signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1248788 102.341 32 10.249 0.01754386
ILMN_2707227 23.73286 43 6.959069 0.1303258
ILMN_2896528 2502.571 44 57.31688 0
ILMN_2721178 357.939 44 13.02304 0
ILMN_1227723 99.52227 45 7.284513 0.02005013
ILMN_3033922 137.4157 31 7.700182 0.00877193
ILMN_3092673 1023.986 51 26.09855 0
ILMN_2730714 1270.753 49 35.58867 0
ILMN_3162224 1704.825 37 42.89116 0
ILMN_2816356 129.5766 32 12.3755 0.01002506
ILMN_2808939 728.2738 45 23.37183 0
ILMN_2634564 423.2562 32 30.98176 0
ILMN_1216623 510.31 42 21.96577 0
ILMN_1215157 628.2998 37 20.10645 0
ILMN_1228777 0.175362 38 5.556717 0.4097744
ILMN_2737647 92.06556 33 25.30884 0.02380952
ILMN_1216425 -5.997348 38 3.018255 0.593985
ILMN_2734484 322.0662 47 13.2121 0
ILMN_2652961 -13.44053 45 2.265296 0.8696742
ILMN_2952292 29.99911 43 6.41118 0.1140351

Total number of rows: 25697

Table truncated, full table size 1067 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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