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Sample GSM3325661 Query DataSets for GSM3325661
Status Public on Aug 10, 2018
Title KO1: Tcl1 knockout 1
Sample type RNA
 
Source name epidermal keratinocytes
Organism Mus musculus
Characteristics tissue: epidermal keratinocytes
genotype: Tcl1-/-
Treatment protocol Mice were depilated to induce hair regeneration and keratinocyte activation. Skin patches were harvested 3-day post-depilation
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Affymetrix GeneChip Mouse Genome 430 assay protocol
 
Hybridization protocol Affymetrix GeneChip Mouse Genome 430 assay protocol
Scan protocol Affymetrix GeneChip scanner 3000-7G
Description Gene expression data from 3-day post-depilation epidermis
Data processing R, Bioconductor. RMA was used for normalization.
 
Submission date Aug 09, 2018
Last update date Aug 10, 2018
Contact name Elisabetta Caprini
E-mail(s) e.caprini@idi.it
Organization name IDI-IRCCS
Street address Via dei Monti di Creta 104
City Roma
State/province Italy
ZIP/Postal code 00167
Country Italy
 
Platform ID GPL8321
Series (1)
GSE118345 Affymetrix Gene Expression array data for Tcl1 mouse model samples

Data table header descriptions
ID_REF
VALUE RMA-normalized signal intensity

Data table
ID_REF VALUE
1415670_at 272.2066744
1415671_at 1595.119167
1415672_at 1563.208585
1415673_at 495.0260343
1415674_a_at 537.4298455
1415675_at 330.3964021
1415676_a_at 1632.510099
1415677_at 878.258139
1415678_at 1045.873756
1415679_at 1453.291133
1415680_at 329.9631098
1415681_at 814.8593331
1415682_at 244.2892715
1415683_at 993.2511519
1415684_at 199.164181
1415685_at 137.0199569
1415686_at 632.2594481
1415687_a_at 2555.178128
1415688_at 948.9354644
1415689_s_at 236.5867624

Total number of rows: 22690

Table truncated, full table size 521 Kbytes.




Supplementary file Size Download File type/resource
GSM3325661_KO1.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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