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Sample GSM3325664 Query DataSets for GSM3325664
Status Public on Aug 10, 2018
Title TGKO1: K14-TCL1 transgenic 1
Sample type RNA
 
Source name epidermal keratinocytes
Organism Mus musculus
Characteristics tissue: epidermal keratinocytes
genotype: K14-TCL1 transgenic
Treatment protocol Mice were depilated to induce hair regeneration and keratinocyte activation. Skin patches were harvested 3-day post-depilation
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Affymetrix GeneChip Mouse Genome 430 assay protocol
 
Hybridization protocol Affymetrix GeneChip Mouse Genome 430 assay protocol
Scan protocol Affymetrix GeneChip scanner 3000-7G
Description Gene expression data from 3-day post-depilation epidermis
Data processing R, Bioconductor. RMA was used for normalization.
 
Submission date Aug 09, 2018
Last update date Aug 10, 2018
Contact name Elisabetta Caprini
E-mail(s) e.caprini@idi.it
Organization name IDI-IRCCS
Street address Via dei Monti di Creta 104
City Roma
State/province Italy
ZIP/Postal code 00167
Country Italy
 
Platform ID GPL8321
Series (1)
GSE118345 Affymetrix Gene Expression array data for Tcl1 mouse model samples

Data table header descriptions
ID_REF
VALUE RMA-normalized signal intensity

Data table
ID_REF VALUE
1415670_at 286.8791544
1415671_at 1598.383455
1415672_at 1578.540876
1415673_at 513.4969428
1415674_a_at 559.1788835
1415675_at 338.851751
1415676_a_at 1524.679232
1415677_at 848.1413535
1415678_at 971.485522
1415679_at 1586.381963
1415680_at 315.5319906
1415681_at 788.403423
1415682_at 218.2660586
1415683_at 990.9617624
1415684_at 213.158234
1415685_at 189.6984023
1415686_at 576.2468155
1415687_a_at 2398.134861
1415688_at 993.5954766
1415689_s_at 247.6682958

Total number of rows: 22690

Table truncated, full table size 521 Kbytes.




Supplementary file Size Download File type/resource
GSM3325664_TGKO1.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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