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Sample GSM3325665 Query DataSets for GSM3325665
Status Public on Aug 10, 2018
Title TGKO2: K14-TCL1 transgenic 2
Sample type RNA
 
Source name epidermal keratinocytes
Organism Mus musculus
Characteristics tissue: epidermal keratinocytes
genotype: K14-TCL1 transgenic
Treatment protocol Mice were depilated to induce hair regeneration and keratinocyte activation. Skin patches were harvested 3-day post-depilation
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Affymetrix GeneChip Mouse Genome 430 assay protocol
 
Hybridization protocol Affymetrix GeneChip Mouse Genome 430 assay protocol
Scan protocol Affymetrix GeneChip scanner 3000-7G
Description Gene expression data from 3-day post-depilation epidermis
Data processing R, Bioconductor. RMA was used for normalization.
 
Submission date Aug 09, 2018
Last update date Aug 10, 2018
Contact name Elisabetta Caprini
E-mail(s) e.caprini@idi.it
Organization name IDI-IRCCS
Street address Via dei Monti di Creta 104
City Roma
State/province Italy
ZIP/Postal code 00167
Country Italy
 
Platform ID GPL8321
Series (1)
GSE118345 Affymetrix Gene Expression array data for Tcl1 mouse model samples

Data table header descriptions
ID_REF
VALUE RMA-normalized signal intensity

Data table
ID_REF VALUE
1415670_at 292.7073158
1415671_at 1582.901359
1415672_at 1618.104074
1415673_at 529.6860057
1415674_a_at 541.5956187
1415675_at 345.4738111
1415676_a_at 1498.551948
1415677_at 840.6133333
1415678_at 999.0908592
1415679_at 1513.461762
1415680_at 340.1358673
1415681_at 847.8457233
1415682_at 222.4617624
1415683_at 1009.731167
1415684_at 248.6063673
1415685_at 224.7117624
1415686_at 629.4440402
1415687_a_at 2419.901205
1415688_at 948.1346065
1415689_s_at 262.0798067

Total number of rows: 22690

Table truncated, full table size 521 Kbytes.




Supplementary file Size Download File type/resource
GSM3325665_TGKO2.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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