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Sample GSM335962 Query DataSets for GSM335962
Status Public on Jul 26, 2009
Title genomic DNA control
Sample type SRA
 
Source name genomicDNA
Organism Homo sapiens
Characteristics HeLa
Treatment protocol Treatment protocol as described in Jin et al., 2008
Growth protocol Growth protocol as described in Jin et al., 2008
Extracted molecule genomic DNA
Extraction protocol Extract protocol as described in Jin et al., 2008
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Description genomic DNA control
Data processing Sequence reads were obtained and mapped to the human (March, 2006) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Jin et al., 2008
 
Submission date Oct 22, 2008
Last update date May 15, 2019
Contact name Chongzhi Zang
Organization name University of Virginia
Street address P. O. Box 800717
City Charlottesville
State/province VA
ZIP/Postal code 22908
Country USA
 
Platform ID GPL9052
Series (1)
GSE13308 Chromatin architecture organized by histone variants H3.3 and H2A.Z in the human genome
Relations
SRA SRX006757
BioSample SAMN02195645

Supplementary file Size Download File type/resource
GSM335962.bed.gz 34.1 Mb (ftp)(http) BED
GSM335962.txt.gz 7.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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