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Sample GSM3372 Query DataSets for GSM3372
Status Public on May 02, 2004
Title EPC-80hrs-2
Sample type RNA
 
Source name purified erythroid progenitor cells from splenocytes, 80 hours after TAP withdrawel
Organism Mus musculus
Extracted molecule total RNA
 
Description Developmentally synchronized erythroid progenitor cells (EPCs) were prepared from splenocytes at 80,100 and 120 hours after Thiamphenical withdrawal (as stages I-III), and purified via MACS. Total RNA preparation, cRNA labeling and hybridization were performed according to recommendations by Affymetrix.
This is the 2nd replicate hybridization with stage I EPCs (Kit +++/ EpoR+++ /Ter119(-)neg, late CFU-e).
Array: Affymetrix GeneChip Murine Genome U74 Version 2 Set MG-U74A
Keywords = erythroid progenitor erythropoiesis profiling
 
Submission date Dec 25, 2002
Last update date May 28, 2005
Contact name Diya Zhang
E-mail(s) WOJCHD@mmc.org , diya@northwestern.edu
Phone (207) 885-8258
Fax (207) 885-8179
URL http://www.mmcri.org
Organization name Maine Medical Center Research Institute
Department Molecular Medicine
Lab Dr. Don M. Wojchowski
Street address 81 Research Drive
City Scarborough
State/province ME
ZIP/Postal code 04074
Country USA
 
Platform ID GPL81
Series (1)
GSE135 Erythroid Progenitor Cell Gene Expression Profiles

Data table header descriptions
ID_REF
VALUE Signal output for each probeset from GeneChip 5.0 algorithm
ABS_CALL Detection call (absent, present, marginal) from GeneChip 5.0 algorithm
P_VALUE Detection P-value between signals from PerfectMatch probes and MisMatch probes

Data table
ID_REF VALUE ABS_CALL P_VALUE
AFFX-MURINE_B2_at 124099.4 P 0.00003
AFFX-b-ActinMur/M12481_5_at 33702.8 P 0.000044
AFFX-CreX-3_at 67485.2 P 0.000044
AFFX-b-ActinMur/M12481_M_at 54831 P 0.000044
AFFX-CreX-5_at 42515.5 P 0.000044
AFFX-GapdhMur/M32599_3_at 39677.1 P 0.000044
AFFX-b-ActinMur/M12481_3_at 75625.5 P 0.000044
AFFX-GapdhMur/M32599_5_at 26917.1 P 0.000044
AFFX-TransRecMur/X57349_3_at 1531.3 P 0.000095
AFFX-MUR_b2_at 6020 P 0.00004
AFFX-BioC-5_at 5206.1 P 0.000169
AFFX-BioDn-3_at 27124 P 0.000127
AFFX-GapdhMur/M32599_M_at 32189.6 P 0.000052
96255_at 1848.4 P 0.000219
99149_at 1363.2 P 0.000219
94275_at 4900.3 P 0.000219
103340_at 10816.4 P 0.000219
102770_at 12155.3 P 0.000219
100440_f_at 9007.2 P 0.000219
99457_at 7195.4 P 0.000219

Total number of rows: 12488

Table truncated, full table size 324 Kbytes.




Supplementary data files not provided

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