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Status
Public on Apr 21, 2003
Title
HDMTX-18
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: dpatel Algorithm: Statistical Corner+ Avg:330, Count:32 Corner- Avg:41279, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.512681,SFGene:All Background:Avg:390.00,Stdev:5.76,Max:401.2,Min:375.3 Noise:Avg:7.98,Stdev:0.33,Max:9.2,Min:7.0 RawQ:12.14 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE226
HDMTX-18 pair
GSE268
HDMTX
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
685.2
0.048995
1001_at
255.9
0.017001
1002_f_at
89.8
0.810313
1003_s_at
49.8
0.732537
1004_at
20.9
0.901946
1005_at
191.2
0.458816
1006_at
141.6
0.250724
1007_s_at
949.6
0.003585
1008_f_at
1487.5
0.000388
1009_at
5893.2
0.000266
100_g_at
613.6
0.060419
1010_at
134.5
0.339558
1011_s_at
1960.5
0.000388
1012_at
104.3
0.581931
1013_at
4.4
0.956032
1014_at
1061.3
0.021866
1015_s_at
47.7
0.933135
1016_s_at
145.7
0.861235
1017_at
9.0
0.926170
1018_at
101.9
0.641310
Total number of rows: 12625 Table truncated, full table size 295 Kbytes .Supplementary data files not provided