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Sample GSM3406 Query DataSets for GSM3406
Status Public on Apr 21, 2003
Title HDMTX-17
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: dpatel
Algorithm: Statistical
Corner+ Avg:325, Count:32
Corner- Avg:40125, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:4.084172,SFGene:All
Background:Avg:636.91,Stdev:54.68,Max:958.1,Min:573.4
Noise:Avg:12.64,Stdev:5.61,Max:47.9,Min:9.0
RawQ:15.96
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE225 HDMTX-17 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 814.6 0.021866
1001_at 289.2 0.027860
1002_f_at 26.8 0.983000
1003_s_at 129.9 0.602006
1004_at 226.8 0.641310
1005_at 4218.7 0.000219
1006_at 37.7 0.926170
1007_s_at 970.8 0.002617
1008_f_at 1937.2 0.000805
1009_at 4091.0 0.000219
100_g_at 585.0 0.066865
1010_at 41.5 0.824011
1011_s_at 1380.4 0.000388
1012_at 126.5 0.189687
1013_at 66.3 0.939581
1014_at 1066.5 0.002617
1015_s_at 85.5 0.951005
1016_s_at 33.6 0.933135
1017_at 140.0 0.581931
1018_at 32.5 0.939581

Total number of rows: 12625

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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