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Sample GSM3412 Query DataSets for GSM3412
Status Public on Apr 21, 2003
Title HDMTX-15
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:366, Count:32
Corner- Avg:40460, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:3.576670,SFGene:All
Background:Avg:393.51,Stdev:6.89,Max:411.1,Min:376.0
Noise:Avg:8.31,Stdev:0.25,Max:9.0,Min:7.7
RawQ:12.20
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE223 HDMTX-15 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 905.3 0.009985
1001_at 487.8 0.002617
1002_f_at 27.6 0.810313
1003_s_at 108.0 0.641310
1004_at 135.1 0.561639
1005_at 1986.5 0.000219
1006_at 15.7 0.892699
1007_s_at 1779.8 0.000562
1008_f_at 1238.0 0.000805
1009_at 4045.9 0.000266
100_g_at 418.5 0.066865
1010_at 10.6 0.749276
1011_s_at 2096.3 0.000266
1012_at 112.8 0.127645
1013_at 37.2 0.837065
1014_at 1166.3 0.000805
1015_s_at 190.0 0.458816
1016_s_at 10.3 0.910595
1017_at 69.8 0.561639
1018_at 18.3 0.861235

Total number of rows: 12625

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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