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Sample GSM3415 Query DataSets for GSM3415
Status Public on Apr 21, 2003
Title HDMTX-14
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: dpatel
Algorithm: Statistical
Corner+ Avg:215, Count:32
Corner- Avg:34690, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:20.939404,SFGene:All
Background:Avg:370.42,Stdev:5.24,Max:379.7,Min:353.7
Noise:Avg:7.00,Stdev:0.17,Max:7.5,Min:6.1
RawQ:11.93
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE222 HDMTX-14 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 1163.7 0.089405
1001_at 539.2 0.024711
1002_f_at 396.0 0.749276
1003_s_at 83.4 0.922182
1004_at 279.4 0.849473
1005_at 1495.7 0.001602
1006_at 552.4 0.234557
1007_s_at 865.3 0.204022
1008_f_at 6953.7 0.001354
1009_at 2848.1 0.000673
100_g_at 403.1 0.697453
1010_at 433.8 0.418069
1011_s_at 1406.6 0.002228
1012_at 521.5 0.418069
1013_at 20.4 0.926170
1014_at 1074.8 0.005643
1015_s_at 86.7 0.994357
1016_s_at 48.5 0.882840
1017_at 268.1 0.781017
1018_at 37.6 0.781017

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

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