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Status
Public on Apr 21, 2003
Title
HDMTX-14
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: dpatel Algorithm: Statistical Corner+ Avg:215, Count:32 Corner- Avg:34690, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:20.939404,SFGene:All Background:Avg:370.42,Stdev:5.24,Max:379.7,Min:353.7 Noise:Avg:7.00,Stdev:0.17,Max:7.5,Min:6.1 RawQ:11.93 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE222
HDMTX-14 pair
GSE268
HDMTX
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
1163.7
0.089405
1001_at
539.2
0.024711
1002_f_at
396.0
0.749276
1003_s_at
83.4
0.922182
1004_at
279.4
0.849473
1005_at
1495.7
0.001602
1006_at
552.4
0.234557
1007_s_at
865.3
0.204022
1008_f_at
6953.7
0.001354
1009_at
2848.1
0.000673
100_g_at
403.1
0.697453
1010_at
433.8
0.418069
1011_s_at
1406.6
0.002228
1012_at
521.5
0.418069
1013_at
20.4
0.926170
1014_at
1074.8
0.005643
1015_s_at
86.7
0.994357
1016_s_at
48.5
0.882840
1017_at
268.1
0.781017
1018_at
37.6
0.781017
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided